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Table 3 Statistics of the final assembly, including the total numbers of base pairs on each chromosome and unplaced scaffolds

From: An improved genome release (version Mt4.0) for the model legume Medicago truncatula

Seqid

Real

N’s

Total

% of real bases

% aligned to optical map

chr1

50,275,726

2,715,429

52,991,155

94.9 %

86.9 %

chr2

43,694,219

2,035,453

45,729,672

95.5 %

84.3 %

chr3

52,386,245

3,128,907

55,515,152

94.4 %

83.8 %

chr4

54,533,855

2,048,528

56,582,383

96.4 %

89.6 %

chr5

43,376,507

254,224

43,630,731

99.4 %

92.6 %

chr6

31,992,419

3,283,294

35,275,713

90.7 %

79.3 %

chr7

46,512,325

2,660,098

49,172,423

94.6 %

85.4 %

chr8

43,183,948

2,386,037

45,569,985

94.8 %

81.9 %

chr total

365,955,244

18,511,970

384,467,214

95.2 %

85.7 %

Unplaced

24,050,008

4,319,556

28,369,564

84.8 %

n. a.