Skip to main content
Figure 3 | BMC Genomics

Figure 3

From: A customized Web portal for the genome of the ctenophore Mnemiopsis leidyi

Figure 3

Several customized tracks can be displayed on the Mnemiopsis genome browser, implemented in JBrowse. Here, we present a predicted protein model (ML000129a) containing G-protein-coupled receptor domains, as evidenced by the PFAM2.2 track. Transcripts assembled from RNA-seq reads support the predicted protein model as depicted in the CL2 track. Transcripts are presented as gray arrows indicating the orientation of the transcript. Exons are presented as light-colored solid bars and untranslated regions (both 5’ and 3’) are darker-shaded bars. Assembled genomic scaffolds (SCF) are depicted as solid black tracks with intermittent gaps shaded bright pink. The MASK track also appears as a solid black bar highlighted with blue in the genomic regions that have been repeat-masked using VMatch. Other tracks shown include an EST and several unfiltered protein prediction models (2.2UF). Additional tracks are described in the main text.

Back to article page