Table 2 Yeast One-Hybrid Screening with cis -sequences
Seq. | Cis-sequence | Interacting transcription factors | ||
|---|---|---|---|---|
Nr | Group | Sequence | Main family | All families |
1 | I | AACGTGGG | N.D. | bHLH (1), GATA (1), MADS (1), 3R-MYB (1), NAC (1) |
2 | I | GCACGTGGAG | bHLH (7/7) | bHLH (7) |
3 | II | GCTGCCGGAGA | NAC (2/2) | NAC (2) |
4 | II | GCCACGTCAGC | NAC (1/1) | NAC (1) |
5 | III | GGTTGTGGT | MYB (14/14) | MYB (14) |
6 | III | ACCAAACAT | MYB (4/4) | MYB (4) |
7 | III | CACCTAAC | MYB (16/16) | MYB (16) |
8 | III | TCGGACCAA | None | - |
9 | IV | CTCTCTCAC | bZIP (2/3) | bZIP (2), NAC (1) |
10 | V | ATGTGATGC | bHLH (4/4) | bHLH (4) |
11 | V | GCATCACCC | N.D. | G2-like (1), Zn finger (1) |
12 | VI | CCAACTAA | MYB (17/17) | MYB (17) |
13 | VII | TCTCCTCCAC | N.D. | bHLH (1), bZIP (1), NAC (1) |
14 | VII | CTTTCCCC | N.D. | C3HC4 (1), MYB (1), WRKY (1) |
15 | VII | CCTCCTTCT | None | - |