Table 3 Clustering of de novo synthesized proteins with identified functional assignment
Cluster | Response pattern | Transcripts/genes | Functional role |
|---|---|---|---|
1 | L→H & N→H low | DHAR | Antioxidant defence |
GAPDH B subunit | Photosynthesis | ||
PSII subunit O-2 | Photosynthesis | ||
PSII subunit P-1 | Photosynthesis | ||
Ribose 5-P isomerase A | Photosynthesis | ||
RPL12, ribosomal protein | Protein synthesis | ||
SOD, Cu/Zn | Antioxidant defence | ||
Thioredoxin m2 | Redox regulation | ||
2 | L→H & N→H high | Carbonic anhydrase 2 | Photosynthesis |
Chaperonin 60 beta | Protein folding | ||
FBP aldolase1 | Photosynthesis | ||
FBP aldolase 2 | Photosynthesis | ||
HCF 136 | Photosynthesis | ||
HSP 70-1, cp | Stress response | ||
Lactate/malate DH | Respiration | ||
O-Acetyl serine thiol lyase B | Sulfur metabolism | ||
3 | N→H high, L→H low | 3-Ketoacyl CoA thiolase 3 | Fatty acid metabolism |
GAP C2 subunit | Photosynthesis | ||
Glutamine synthetase 2 | Nitrogen metabolism | ||
Phosphoglycerate kinase 1 | Photosynthesis | ||
Phosphoribulo kinase | Photosynthesis | ||
Rubisco activase | Photosynthesis | ||
Plastid-lipid-associated protein 1 | Stress response | ||
RubisCO SU 1A | Photosynthesis | ||
SBPase | Photosynthesis | ||
SAM synthetase 1 | Sulfur metabolism | ||
4 | N, N→H-high; L, L→H-low | ATP synthase beta | Photosynthesis |
ATP synthase delta | Photosynthesis | ||
APX 1 | Antioxidant defence | ||
APx, stromal, cp | Antioxidant defence | ||
Carbonic anhydrase 1 | Photosynthesis | ||
Cyclophilin Cyp 20-3 | Redox regulation | ||
Malate DH cyt | Redox regulation | ||
PSII OEC | Photosynthesis | ||
No peculiar group pattern | Â | 2-Cys Peroxiredoxin | Antioxidant defence |
Germin 3 oxalate oxidase | Stress defence | ||
GST F8 | Stress defence | ||
GST F9 | Stress defence | ||
HSP 70-2, cp | Stress defence | ||
Malate DH, cp | Redox regulation | ||
Mn SOD | Antioxidant defence | ||
Phosphoglycerate mutase | Glycolysis | ||
Plastocyanin (DRT 112) | Photosynthesis | ||
Ribosomal protein S1 | Protein synthesis | ||
RubisCo large subunit | Photosynthesis | ||
Ribulose-5-P epimerase | Photosynthesis | ||
Thioredoxin m1 | Redox regulation | ||
Triosephosphate isomerase | Photosynthesis |