Table 1 Genome sizes and numbers of PKS-I, NRPS, and PKS-I/NRPS hybrid gene clusters in Nocardia strains
Strain name | Genome size* (Mb) | State of sequence | Source | Number of gene clusters (Average number of genes/modules per cluster) | |||
|---|---|---|---|---|---|---|---|
| Â | Â | Â | Â | PKS-I | NRPS | PKS-I/NRPS hybrid | Total number of clusters |
N. farcinica IFM 10152 [11] | 6.0 | Complete | Clinical (human sputum) | 4 | 7 | 1 | 12 |
(1.0/1.0)¶ | (1.6/7.7) | (6.0/5.0) | (1.8/5.6) | ||||
6.2 | Complete | Clinical (human kidney) | 5 | 9 | 1 | 15 | |
(1.2/1.0) | (1.4/5.8) | (8.0/8.0) | (1.8/4.3) | ||||
7.0 | Draft | Clinical (fatal brain abscess) | 7 | 13 | 2 | 22 | |
(1.4/2.6) | (1.2/4.5) | (4.0/4.0) | (1.5/3.9) | ||||
N. otitidiscaviarum IFM 11049 [31] | 7.8 | Draft | Clinical (human sputum) | 4 | 12 | 2 | 18 |
(1.0/1.0) | (1.2/3.3) | (4.0/11.0) | (1.5/3.6) | ||||
8.9 | Draft | Clinical (leg lesion) | 10 | 13 | 4 | 27 | |
(1.4/1.1) | (1.6/5.0) | (5.5/4.3) | (2.1/3.4) | ||||
N. brasiliensis IFM 10847 [12] | 9.2 | Draft | Clinical (human pus) | 11 | 13 | 6 | 30 |
(1.5/1.1) | (1.5/5.1) | (4.8/4.3) | (2.2 /3.5) | ||||
N. brasiliensis HUJEG-1 [10] | 9.4 | Complete | Clinical (human mycetoma) | 11 | 13 | 6 | 30 |
| Â | Â | Â | Â | (1.4/1.2) | (1.3/4.5) | (4.8/4.3) | (2.0/3.2) |