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Table 1 Overview of the sequencing and assembly

From: Deep-sequencing transcriptome analysis of low temperature perception in a desert tree, Populus euphratica

Sequences

CK

C4

F4

Total Raw Reads

139,967,622

144,120,358

146,769,184

Total Clean Reads

132,575,472

135,458,532

134,977,754

Total Clean Nucleotides (nt)

11,931,792,480

12,191,267,880

12,147,997,860

Q20 percentage

97.66%

97.41%

97.63%

N percentage

0.00%

0.00%

0.00%

Total Number of contig

185,758

180,385

190,969

Total Length of contig (nt)

59,420,994

58,876,674

62,206,357

Mean Length of contig (nt)

320

326

326

N50 of contig

524

530

523

Total Number of unigne

98,171

103,563

108,769

Total Length of unigne (nt)

73,038,351

83,985,593

86,583,871

Mean Length of unigne (nt)

744

811

796

N50 of unigene

1462

1631

1601