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Table 1 Motif enrichment in cell type specific enhancers

From: Nucleosome positioning and histone modifications define relationships between regulatory elements and nearby gene expression in breast epithelial cells

Motif name

Number of motif in HSEL

Number of motif in MSEL

P-value

Database

TP63

116

4

7.36E-30

TRANSFAC

FOS

398

650

2.90E-24

JASPAR

FOS

352

589

3.09E-21

JASPAR

FOS

49

173

6.27E-19

TRANSFAC

FOS

42

183

2.56E-17

TRANSFAC

FOXA1

277

468

8.01E-16

JASPAR

FOS

352

585

5.15E-14

JASPAR

FOS

39

133

9.59E-14

TRANSFAC

FOXA2

339

514

1.92E-12

JASPAR

FOS

32

143

2.92E-12

TRANSFAC

FOXA1

47

124

4.37E-12

TRANSFAC

FOXA1

32

134

6.36E-12

TRANSFAC

FOS

306

524

6.91E-12

JASPAR

TCF4

95

215

2.33E-10

TRANSFAC

FOXA1

49

117

3.29E-10

TRANSFAC

FOXA1

34

127

4.05E-10

TRANSFAC

FOXA2

9

59

1.41E-08

TRANSFAC

FOXA1

40

129

1.48E-08

TRANSFAC

FOXA1

43

89

2.57E-07

TRANSFAC

FOXA1

28

99

2.91E-07

TRANSFAC

FOXI1

232

347

4.49E-07

JASPAR

FOXA1

34

122

4.80E-07

TRANSFAC

FOXF2

128

214

3.00E-06

JASPAR

FOXD1

121

202

6.78E-06

JASPAR

NR4A2

226

326

1.07E-05

JASPAR

FOXA1

38

94

1.53E-04

TRANSFAC

MAF

220

324

2.61E-04

TRANSFAC

FOXQ1

150

221

2.86E-04

JASPAR

FOXO3

221

303

3.23E-04

JASPAR

MYB

110

139

5.55E-04

TRANSFAC

BACH2

11

36

1.08E-03

TRANSFAC

RORA

208

257

3.94E-03

JASPAR

NFATC2

250

320

4.21E-03

JASPAR

TFCP2

223

200

5.15E-03

TRANSFAC

ELK1

64

101

6.46E-03

JASPAR

SMAD3

106

83

6.92E-03

TRANSFAC

NFE2L2

277

344

9.47E-03

JASPAR

HLTF

81

120

9.77E-03

JASPAR

PPARA

69

84

1.18E-02

TRANSFAC

NFYA

110

152

1.57E-02

JASPAR

MYB

78

97

1.76E-02

TRANSFAC

GABPA

337

404

1.80E-02

JASPAR

RORA

176

237

1.80E-02

JASPAR

MYB

73

107

1.83E-02

JASPAR

NF1

90

72

1.95E-02

TRANSFAC

EP300

170

153

2.05E-02

TRANSFAC

RORA

174

207

3.84E-02

JASPAR

ZEB1

25

15

4.47E-02

TRANSFAC