A summary of coverage analysis. Top hit in standard paired end and in mate-pair library analysis shown at different coverage (3 technical replicates). The max (score) corresponds to number of reads mapping in 1000 bp blocks. Chr2 is not plotted in the analysis for Prp-TDP43A315T as Chr2 reads represent the endogenous mouse Prnp locus. Using the same max (score) the SOD1-G93A and Prp-TDP43A315T transgene has only two points on the plot, at 5X and 15X coverage, respectively.