From: Discovery of transgene insertion sites by high throughput sequencing of mate pair libraries
Categories | SOD1-G93A (PE)* | Prp-TDP43A315T(PE) | SOD1-G93A (MP)* | Prp-TDP43A315T(MP) |
---|---|---|---|---|
Total number of reads | 478630820 | 474440050 | 900015938 | 822321006 |
Quality filtered reads | 370691294 | 369292346 | 675672452 | 662089438 |
Raw coverage# | 17.73 | 17.57 | 33.33 | 30.46 |
Analysis coverage# | 13.73 | 13.68 | 25.02 | 24.52 |
Orphaned reads mapped to Mus | 388 | 2371 | 8034 | 8386 |
Reads found in the candidates insertion site region | 3 | 5 | 113 | 99 |