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Table 3 Genome sequences used in the genomic comparison

From: Genome analysis and CRISPR typing of Salmonella enterica serovar Virchow

Ring1

Genome

Strain

GenBank accession

Reference

6

Salmonella enterica subsp. enterica serovar Virchow

SL491

ABFH00000000

[38]

7

Salmonella enterica subsp. enterica serovar Heidelberg

SL476

CP001120

[38]

Salmonella enterica subsp. enterica serovar Heidelberg

SL486

ABEL00000000

[38]

8

Salmonella enterica subsp. enterica serovar Newport

SL254

CP001113

[38]

Salmonella enterica subsp. enterica serovar Newport

SL317

ABEW00000000

[38]

9

Salmonella enterica subsp. enterica serovar Typhimurium

LT2

AE006468

[53]

Salmonella enterica subsp. enterica serovar Typhimurium

UK-1

CP002614

[54]

10

Salmonella enterica subsp. enterica serovar Saintpaul

SARA23

ABAM02000001

[38]

Salmonella enterica subsp. enterica serovar Saintpaul

SARA29

ABAN00000000

[38]

11

Salmonella enterica subsp. enterica serovar Hadar

RI_05P066

ABFG01000000

[38]

12

Salmonella enterica subsp. enterica serovar Choleraesuis

SC-B67

AE017220

[55]

13

Salmonella enterica subsp. enterica serovar Paratyphi C

RKS4594

CP000857

[56]

14

Salmonella enterica subsp. enterica serovar Agona

SL483

CP001138

[38]

15

Salmonella enterica subsp. enterica serovar Kentucky

CDC 191

ABEI01000000

[38]

Salmonella enterica subsp. enterica serovar Kentucky

SL475

ABAK02000001

[38]

16

Salmonella enterica subsp. enterica serovar Weltevreden

HI_N05-537

ABFF00000000

[38]

17

Salmonella enterica subsp. enterica serovar Dublin

CT_02021853

CP001144

[38]

18

Salmonella enterica subsp. enterica serovar Enteritidis

P125109

AM933172

[57]

19

Salmonella enterica subsp. enterica serovar Gallinarum

287/91

AM933173

[57]

20

Salmonella enterica subsp. enterica serovar Paratyphi B

SPB7

CP000886

W.U. Genome Sequencing Centre

21

Salmonella enterica subsp. enterica serovar Schwarzengrund

SL480

ABEJ01000000

[38]

Salmonella enterica subsp. enterica serovar Schwarzengrund

CVM19633

CP001127

[38]

22

Salmonella enterica subsp. enterica serovar Javiana

SL478

ABEH00000000

[38]

23

Salmonella enterica subsp. enterica serovar Paratyphi A

ATCC9150

CP000026

[53]

24

Salmonella enterica subsp. enterica serovar Typhi

CT18

AL513382

[41]

Salmonella enterica subsp. enterica serovar Typhi

Ty2

AE014613

[58]

25

Salmonella enterica subsp. arizonae serovar 62:z4,z23

RKS2980

CP000880

W.U. Genome Sequencing Centre

  1. 1Genomes are listed as they appear in Figure 3, from innermost to outermost. Rings 1 to 5 correspond to S. Virchow SVQ1 genome position, GC skew, GC content, coverage and contig boundaries, respectively.