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Table 4 Enzymes involved in the biosynthesis of precursors of mono-, sesqui- and diterpenes

From: RNA sequencing on Solanum lycopersicum trichomes identifies transcription factors that activate terpene synthase promoters

Abbreviation

Name

Chr

SGN nr

Expression values JA*

Expression values C*

Fold JA induction

AACT

acetoacetyl-coenzyme A thiolase

5

SGN-U566720

351.04

275.21

1.27

 

7

SGN-U566719

126.3

133.52

0.94

HMGS

3-hydroxy-3-methylglutaryl-CoA synthase

8

SGN-U579858

14.96

15.98

0.93

 

8

SGN-U578388

205.34

123.57

1.66

HMGR

3-hydroxy-3-methylglutaryl-CoA reductase

2

SGN-U580675

2.2

1.06

2.07

 

2

SGN-U578017

19.2

22.19

0.86

 

3

SGN-U579319

43.35

24.5

1.77

MVK

mevalonate kinase

1

SGN-U567385

198.89

125

1.59

pMVK

phosphomevalonate kinase

8

SGN-U583971

46.92

54.51

0.86

MDC

mevalonate diphosphate decarboxylase

4

SGN-U587221

3.4

3.19

1.06

 

11

SGN-U581971

26.68

35.51

0.75

DXS1

1-deoxy-D-xylulose 5-phosphate synthase 1

1

SGN-U567647

24.14

35.33

0.68

DXS2

1-deoxy-D-xylulose 5-phosphate synthase 2

11

SGN-U582996

37.23

22.72

1.64

DXR

1-deoxy-D-xylulose 5-phosphate reductoisomerase

3

SGN-U585813

657.7

497.34

1.32

MCT

4-diphosphocytidyl-2-C-methyl-D-erythritol synthase

1

SGN-U566797

107.95

121.45

0.89

CMK

4-diphosphocytidyl-2-C-methyl-D-erythritol kinase

1

SGN-U583224

275.9

237.57

1.16

MDS

2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

8

SGN-U568497

36.72

41.73

0.88

HDS

1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase

11

SGN-U567167

30.43

12.25

2.48

HDR

1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase

1

SGN-U580658

2916.93

2720.54

1.07

IDI

isopentenyl diphosphate isomerase

5

SGN-U569721

3.4

1.95

1.74

  

4

SGN-U577516

957.4

749.11

1.28

GPS

geranyl diphosphate synthase

8

SGN-U573523

2.71

3.36

0.8

NDPS (CPT1)

neryl diphosphate synthase

8

SGN-U583641

2810.51

4696.4

0.6

FPS

farnesyl diphosphate synthase

12

SGN-U580757

11.05

9.76

1.13

 

10

SGN-U578686

0.68

1.24

0.55

 

10

SGN-U581576

15.98

25.21

0.63

GGPS

geranyl geranyl diphosphate synthase

4

SGN-U571085

6.12

7.46

0.82

 

9

SGN-U575882

63.58

66.05

0.96

 

2

SGN-U573348

17.17

34.8

0.49

CPT3

cis-prenyl transferase 3

3

SGN-U572901

14.45

17.58

0.82

CPT4

cis-prenyl transferase 4

10

SGN-U568982

9.52

7.28

1.3

CPT5

cis-prenyl transferase 5

10

SGN-U585528

120.17

70.3

1.7

CPT7

cis-prenyl transferase 7

6

SGN-U574892

291.53

471.59

0.62

  1. Chr; chromosome.
  2. *Expression values are in RPKM (reads per kilobase of transcript per million mapped reads).
  3. For an overview of the biosynthetic pathway see Figure 1.