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Table 2 Number of transcripts identified as always up- or down-regulated in a specific polyp

From: Differential gene expression between functionally specialized polyps of the colonial hydrozoan Hydractinia symbiolongicarpus (Phylum Cnidaria)

  padj < .05
  DESeq edgeR Both
  Up Down Up Down Up Down
Gastrozooid 1,067 40 1,934 148 955 31
Gonozooid 3,505 3,405 11,304 1,851 3,491 1,562
Dactylozooid 444 29 999 180 332 20
  1. Transcripts that have support as polyp-specific (must be significant in only two of the three pairwise comparisons) by both DESeq and edgeR are what we refer to as polyp-specific in the text.
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BMC Genomics

ISSN: 1471-2164

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