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Table 2 Annotation results of the eggplant and turkey berry unigenes

From: Comparative transcriptome analysis of eggplant (Solanum melongena L.) and turkey berry (Solanum torvum Sw.): phylogenomics and disease resistance analysis

  

Turkey berry

Eggplant

  

Number

Percentage

Number

Percentage

Functional annotations

Total

29,845

78.16%

28,016

81.98%

NR

29,072

76.13%

27,393

80.16%

Solanum

29,571

77.44%

27,846

81.48%

SwissProt

17,269

45.22%

16,021

46.88%

KEGG

14,666

38.41%

13,754

40.25%

COG

9,089

23.80%

8,419

24.64%

GO

17,890

46.85%

16,982

49.69%

CDS annotations

Total

32,086

84.03%

29,717

86.96%

Homolog

27,849

72.93%

26,251

76.82%

ESTScan

406

1.06%

278

0.81%

HMM

3,831

10.03%

3,188

9.33%

  1. CDS: coding sequence, NR: NCBI non-redundant protein database, Solanum: potato (PGSC DM 3.4) and tomato (ITAG2.3) genomes, KEGG: Kyoto Encyclopedia of Genes and Genomes, COG: NCBI clusters of orthologous groups database, GO: gene ontology determined by BLAST2GO, Homolog: CDS annotated with homologous approach, ESTScan: CDS annotated by ESTScan software, HMM: CDS modeled by fifth-order HMM (hidden Markov Model).
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BMC Genomics

ISSN: 1471-2164

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