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Table 2 Annotation results of the eggplant and turkey berry unigenes

From: Comparative transcriptome analysis of eggplant (Solanum melongena L.) and turkey berry (Solanum torvum Sw.): phylogenomics and disease resistance analysis

   Turkey berry Eggplant
   Number Percentage Number Percentage
Functional annotations Total 29,845 78.16% 28,016 81.98%
NR 29,072 76.13% 27,393 80.16%
Solanum 29,571 77.44% 27,846 81.48%
SwissProt 17,269 45.22% 16,021 46.88%
KEGG 14,666 38.41% 13,754 40.25%
COG 9,089 23.80% 8,419 24.64%
GO 17,890 46.85% 16,982 49.69%
CDS annotations Total 32,086 84.03% 29,717 86.96%
Homolog 27,849 72.93% 26,251 76.82%
ESTScan 406 1.06% 278 0.81%
HMM 3,831 10.03% 3,188 9.33%
  1. CDS: coding sequence, NR: NCBI non-redundant protein database, Solanum: potato (PGSC DM 3.4) and tomato (ITAG2.3) genomes, KEGG: Kyoto Encyclopedia of Genes and Genomes, COG: NCBI clusters of orthologous groups database, GO: gene ontology determined by BLAST2GO, Homolog: CDS annotated with homologous approach, ESTScan: CDS annotated by ESTScan software, HMM: CDS modeled by fifth-order HMM (hidden Markov Model).