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Table 2 2-SNP blocks from 12 inbred mouse strains divided into blocks with 0, 1, 2, 3 or 4 different haplotypes directly observed using LHA

From: Direct observation of genomic heterogeneity through local haplotyping analysis

Strain Total 2-blocks Number of haplotypes in the 2-SNP block
   0 1 2 3 4
129P2 51,379 36,355 (70%) 13,420 (26%) 1,566 (3%) 37 (0%) 0 (0%)
AJ 76,834 27,027 (35%) 31,894 (42%) 16,346 (21%) 1,564 (2%) 3 (0%)
AKRJ 76,059 24,147 (31%) 29,400 (39%) 20,235 (27%) 2,263 (3%) 14 (0%)
BALBcJ 76,942 23,957 (31%) 30,319 (39%) 20,345 (26%) 2,319 (3%) 1 (0%)
C3HHeJ 83,505 26,814 (32%) 32,706 (39%) 21,555 (26%) 2,424 (3%) 6 (0%)
CASTEiJ 148,289 59,358 (40%) 54,330 (37%) 32,196 (22%) 2,393 (2%) 11 (0%)
CBAJ 81,455 27,571 (33%) 33,471 (41%) 18,562 (23%) 1,848 (2%) 3 (0%)
FVBNJ 75,529 23,653 (31%) 27,068 (36%) 21,885 (29%) 2,911 (4%) 12 (0%)
LPJ 80,790 28,320 (35%) 33,192 (41%) 17,521 (22%) 1,751 (2%) 6 (0%)
NODshiLtJ 80,305 27,229 (33%) 32,416 (40%) 18,621 (23%) 2,033 (3%) 6 (0%)
PWKPhJ 140,567 55,784 (40%) 51,437 (37%) 31,151 (22%) 2,182 (2%) 12 (0%)
SPRETEiJ 182,324 69,660 (38%) 62,565 (34%) 47,270 (26%) 2,804 (2%) 23 (0%)