From: Direct observation of genomic heterogeneity through local haplotyping analysis
Strain | Total 2-blocks | Number of haplotypes in the 2-SNP block | ||||
---|---|---|---|---|---|---|
0 | 1 | 2 | 3 | 4 | ||
129P2 | 51,379 | 36,355 (70%) | 13,420 (26%) | 1,566 (3%) | 37 (0%) | 0 (0%) |
AJ | 76,834 | 27,027 (35%) | 31,894 (42%) | 16,346 (21%) | 1,564 (2%) | 3 (0%) |
AKRJ | 76,059 | 24,147 (31%) | 29,400 (39%) | 20,235 (27%) | 2,263 (3%) | 14 (0%) |
BALBcJ | 76,942 | 23,957 (31%) | 30,319 (39%) | 20,345 (26%) | 2,319 (3%) | 1 (0%) |
C3HHeJ | 83,505 | 26,814 (32%) | 32,706 (39%) | 21,555 (26%) | 2,424 (3%) | 6 (0%) |
CASTEiJ | 148,289 | 59,358 (40%) | 54,330 (37%) | 32,196 (22%) | 2,393 (2%) | 11 (0%) |
CBAJ | 81,455 | 27,571 (33%) | 33,471 (41%) | 18,562 (23%) | 1,848 (2%) | 3 (0%) |
FVBNJ | 75,529 | 23,653 (31%) | 27,068 (36%) | 21,885 (29%) | 2,911 (4%) | 12 (0%) |
LPJ | 80,790 | 28,320 (35%) | 33,192 (41%) | 17,521 (22%) | 1,751 (2%) | 6 (0%) |
NODshiLtJ | 80,305 | 27,229 (33%) | 32,416 (40%) | 18,621 (23%) | 2,033 (3%) | 6 (0%) |
PWKPhJ | 140,567 | 55,784 (40%) | 51,437 (37%) | 31,151 (22%) | 2,182 (2%) | 12 (0%) |
SPRETEiJ | 182,324 | 69,660 (38%) | 62,565 (34%) | 47,270 (26%) | 2,804 (2%) | 23 (0%) |