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Table 1 Differentially methylated regions (DMRs) after TGF-β exposure in two liver cancer cell lines and two time points (4 days treatment and 4 additional days post-release)

From: Dynamic imbalance between cancer cell subpopulations induced by Transforming Growth Factor Beta (TGF-β) is associated with a DNA methylome switch

CHR

Start

End

# probes

EntrezID

Symbol

Distance2TSS

Promoter

chr1

2.26E + 08

2.26E + 08

3

2052

EPHX1

0

TRUE

chr10

1.35E + 08

1.35E + 08

6

10844

TUBGCP2

2052

FALSE

chr12

1.21E + 08

1.21E + 08

4

84747

UNC119B

6288

FALSE

chr13

92002338

92002454

2

407975

MIR17HG

2264

FALSE

chr15

78286548

78286614

2

91450

LOC91450

0

TRUE

chr16

87437787

87437924

2

81631

MAP1LC3B

11986

FALSE

chr17

48270042

48270097

3

1277

COL1A1

8903

FALSE

chr17

48275324

48275919

2

1277

COL1A1

3081

FALSE

chr17

73631586

73631785

2

643008

SMIM5

2072

FALSE

chr17

80560479

80560634

3

3607

FOXK2

6821

FALSE

chr19

23278023

23278036

2

1E + 08

ZNF730

-21741

FALSE

chr19

24232204

24232430

2

9534

ZNF254

15957

FALSE

chr20

31366437

31366486

3

1789

DNMT3B

16246

FALSE

chr5

52096641

52096811

2

53918

PELO

12867

FALSE

chr6

33241410

33241770

4

6222

RPS18

1558

FALSE

chr7

1.35E + 08

1.35E + 08

3

800

CALD1

111142

FALSE

chr7

1.57E + 08

1.57E + 08

3

10049

DNAJB6

1459

FALSE

chr9

1.33E + 08

1.33E + 08

2

23413

NCS1

34026

FALSE

  1. See Methods for definition of DMR.