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Table 1 Differentially methylated regions (DMRs) after TGF-β exposure in two liver cancer cell lines and two time points (4 days treatment and 4 additional days post-release)

From: Dynamic imbalance between cancer cell subpopulations induced by Transforming Growth Factor Beta (TGF-β) is associated with a DNA methylome switch

CHR Start End # probes EntrezID Symbol Distance2TSS Promoter
chr1 2.26E + 08 2.26E + 08 3 2052 EPHX1 0 TRUE
chr10 1.35E + 08 1.35E + 08 6 10844 TUBGCP2 2052 FALSE
chr12 1.21E + 08 1.21E + 08 4 84747 UNC119B 6288 FALSE
chr13 92002338 92002454 2 407975 MIR17HG 2264 FALSE
chr15 78286548 78286614 2 91450 LOC91450 0 TRUE
chr16 87437787 87437924 2 81631 MAP1LC3B 11986 FALSE
chr17 48270042 48270097 3 1277 COL1A1 8903 FALSE
chr17 48275324 48275919 2 1277 COL1A1 3081 FALSE
chr17 73631586 73631785 2 643008 SMIM5 2072 FALSE
chr17 80560479 80560634 3 3607 FOXK2 6821 FALSE
chr19 23278023 23278036 2 1E + 08 ZNF730 -21741 FALSE
chr19 24232204 24232430 2 9534 ZNF254 15957 FALSE
chr20 31366437 31366486 3 1789 DNMT3B 16246 FALSE
chr5 52096641 52096811 2 53918 PELO 12867 FALSE
chr6 33241410 33241770 4 6222 RPS18 1558 FALSE
chr7 1.35E + 08 1.35E + 08 3 800 CALD1 111142 FALSE
chr7 1.57E + 08 1.57E + 08 3 10049 DNAJB6 1459 FALSE
chr9 1.33E + 08 1.33E + 08 2 23413 NCS1 34026 FALSE
  1. See Methods for definition of DMR.
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