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Table 2 Best common population-specific (CPS) SNP-enriched windows for each population

From: Population-specific common SNPs reflect demographic histories and highlight regions of genomic plasticity with functional relevance

Population

Chr

Start

End

No. of SNPs

P-value

Gene or flanking genes

YRI

18

6266587

6271281

26

4.36E-66

L3MBTL4

YRI

12

21347746

21353031

25

9.95E-60

SLCO1B1

LWK

10

26690276

26697294

26

1.19E-59

GAD2 - APBB1IP

LWK

3

132399187

132404788

25

3.74E-56

NPHP3-ACAD11

JPT

2

38809530

38818371

20

5.77E-46

HNRPLL

JPT

4

187416152

187426671

18

7.30E-44

LOC285441-MTNR1A

CHINESE

2

152284636

152297774

12

8.13E-36

RIF1

CHINESE

11

119411414

119420288

11

2.13E-33

LOC100499227- PVRL1

FIN

16

86084552

86093750

4

2.45E-09

IRF8-LOC146513

IBS

3

68079

77942

5

6.40E-10

na-CHL1

IBS

19

52867878

52878655

4

2.77E-08

ZNF610

  1. Population code, genomic coordinates, number of CPS SNPs, p-values and corresponding genes (if window is exonic or intronic) or flanking genes joined by a “-“ (if the window is intergenic), for up to two best 50-SNP windows for each population.
  2. Intergenic window for which no flanking gene was found is indicated by “na”.