The transcriptome of lae1 mutants of Trichoderma reesei cultivated at constant growth rates reveals new targets of LAE1 function

Table 2 Comparison of some FunCat subcategory genes differentially expressed in the Δ lae1 mutant compared to the T. reesei parent strain

Function	FunCat	D = 0.075 [h^-1]		D = 0.020 [h^-1]		Present in the genome		p-value*
Function	FunCat	Down	Up	Down	Up	Number	%	p-value*
Amino acid transporters	20_01_07	11	7	2	3	36	0.4	<0.01
C2H2 transcription factors	11_02_03_04**	3	6	0	1	54	0.6
Cytochrome P450 proteins	32_07	2	6	1	0	61	0.7
Flavin monooxygenases	16_21_05	2	5	0	4	43	0.5
GCN5N-acetyltransferases	14_07	5	3	2	1	20	0.2	<0.02
Glycoside hydrolases	01_25_01	6	10	0	7	194	2.1
Heteroincompatibility proteins	36_20	4	1	1	1	23	0.25	<0.05
Major facilitator superfamily	20_03	16	21	3	11	174	1.9
Mitochondrial function	42_16	3	3	3	1	83	0.9
NRPS	01_20_36	1	2	1	0	10	0.11
PKS	01_20_05	2	1	0	0	12	0.13	<0.05
PTH11-receptors	30_05_02_24	2	3	0	1	24	0.25
SSCRP	70_27	14	12	0	3	130	1.4

*Only given for subcategories that were statistically supported to behave differently in the mutant.
**The subcategory specification refers to all transcription factors; C2H2 transcription factors do not have their own number.

ISSN: 1471-2164