Table 7 Performance of 3-way classification using SVM classifier (feature length 20)
From: Plus ça change – evolutionary sequence divergence predicts protein subcellular localization signals
Divergence | Classical features | Combination | ||||
|---|---|---|---|---|---|---|
AUC | MCC | AUC | MCC | AUC | MCC | |
MTS | 0.67±0.03 | 0.36±0.06 | 0 . 8 9±0.02 | 0.80±0.02 | 0 . 8 9±0.01 | 0 . 8 1±0.02 |
SP | 0.50±0.00 | 0.00±0.00 | 0.97±0.03 | 0.92±0.07 | 0 . 9 8±0.03 | 0 . 9 7±0.04 |
N-signal-free | 0.66±0.02 | 0.36±0.03 | 0 . 9 0±0.01 | 0.81±0.02 | 0 . 9 0±0.01 | 0 . 8 3±0.02 |
% accuracy | 70.82±1.61 | 91.49±1.26 | 9 2 . 2 3±1.25 | |||