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Table 8 Confusion Matrix from 3-way classification using SVM classifier (feature length 20)

From: Plus ça change – evolutionary sequence divergence predicts protein subcellular localization signals

  Divergence Classical features Combination
Predicted → MTS SP N-signal-free MTS SP N-signal-free MTS SP N-signal-free
MTS 83 0 96 148 1 30 144 0 35
SP 16 0 37 0 50 3 1 51 1
N-signal-free 50 0 400 20 4 426 15 1 434
  1. Confusion matrix of the 5-fold cross-validation performance of an SVM classifier using: divergence features only, classical features only, and the two combined; is shown for three-way classification on our entire yeast curated ortholog dataset. Classical features are calculated from N-terminal 20 amino acids.