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Figure 2 | BMC Genomics

Figure 2

From: Genetic control of functional traits related to photosynthesis and water use efficiency in Pinus pinaster Ait. drought response: integration of genome annotation, allele association and QTL detection for candidate gene identification

Figure 2

Graphical representation of the QTL identified on the parental (Gal1056 and Oria6) and consensus (GxO) framework linkage maps (LGs 7 to 12). Only linkage groups for which QTL have been detected are presented. The one and two LOD confidence intervals are indicated by squares and lines, respectively. Colored QTL are the significant QTL (significant at 99% at chromosome level or 95% at genome wide level), with each color representing a different trait, and black QTL are the suggestive QTL (significant at 95% confidence at chromosome level). An = net photosynthetic rate (μmol CO2m-2 s-1); gsw = stomatal conductance to water vapour (molH2Om-2 s-1); WUEi = intrinsic water use efficiency (μmol CO2 molH2O-1); δ13C = isotopic composition of 13C (‰); SLA = specific leaf area (m2Kg-1); Fv’Fm’ = maximum efficiency of PSII under light conditions; ΦPSII = quantum yield. S1, S2 and S3 stand for 1st time-point of measurement (well watered plants), 2nd time-point of measurement (seven days without watering) and 3rd time-point of measurement (14 days without watering) respectively.

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