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Figure 1 | BMC Genomics

Figure 1

From: Comparative transcriptomics of the model mushroom Coprinopsis cinerea reveals tissue-specific armories and a conserved circuitry for sexual development

Figure 1

Differential gene expression during early fruiting body development in C. cinerea . (A) Volcano plot illustrating the relative expression (log2(S1P/VM)) and statistical significance of the 13342 loci in the genome of C. cinerea between VM and S1P. Fisher’s exact test -log10 p-value ≥ 1.3 (p-value ≤ 0.05) and log2(S1P/VM) +/- 3 (8 fold change) were used as thresholds of differential gene expression. Grey boxes comprise genes significantly up-regulated in S1P (right) or VM (left). Tag clouds showing enriched PSI-BLAST functional annotation terms from up-regulated loci in S1P (B) and VM (C) were produced in Wordle (© IBM Corporation) after removing frequently appearing tags.

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BMC Genomics

ISSN: 1471-2164

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