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Table 5 Up- and down-regulation of orthologous loci is conserved in stage 1 primordia and young fruiting bodies of three basidiomycete species

From: Comparative transcriptomics of the model mushroom Coprinopsis cinerea reveals tissue-specific armories and a conserved circuitry for sexual development

Cluster C. cinerealocus S. communelocus L. bicolorlocus Functional annotation*
1(PC†: 0.95) CC1G_01874 SCHCODRAFT_73392 LACBIDRAFT_301146 Hypothetical protein
CC1G_02466 SCHCODRAFT_109665 LACBIDRAFT_297494 Hypothetical protein
CC1G_00973 SCHCODRAFT_83399 LACBIDRAFT_293318 Chitin deacetylase
CC1G_10475 SCHCODRAFT_57566 LACBIDRAFT_295571 Aromatic peroxygenase precursor
CC1G_14095 SCHCODRAFT_48101 LACBIDRAFT_294461 Hypothetical protein
CC1G_03094 SCHCODRAFT_52606 LACBIDRAFT_315775 Hypothetical protein
CC1G_06074 SCHCODRAFT_76530 LACBIDRAFT_293318 Carbohydrate esterase family 4 protein
CC1G_10044 SCHCODRAFT_108884 LACBIDRAFT_306386 Related to S.pombe pac2 protein
CC1G_00753 SCHCODRAFT_234371 LACBIDRAFT_305130 Hypothetical protein
CC1G_14786 SCHCODRAFT_52306 LACBIDRAFT_246776 MFS nicotinic acid transporter Tna1
CC1G_01301 SCHCODRAFT_72462 LACBIDRAFT_309640 Hypothetical protein
CC1G_05059 SCHCODRAFT_52448 LACBIDRAFT_308735 Symbiosis-related protein
CC1G_11437 SCHCODRAFT_67374 LACBIDRAFT_317173 Putative aquaporin 6
CC1G_08178 SCHCODRAFT_237423 LACBIDRAFT_323328 Thioesterase family protein
CC1G_08180 SCHCODRAFT_237423 LACBIDRAFT_323328 Thioesterase
CC1G_01879 SCHCODRAFT_257636 LACBIDRAFT_326397 mei2 protein Piriformospora
CC1G_05223 SCHCODRAFT_70203 LACBIDRAFT_250946 DUF1275 domain protein
CC1G_12219 SCHCODRAFT_28806 LACBIDRAFT_317102 Related to velvet A protein
CC1G_10750 SCHCODRAFT_86141 LACBIDRAFT_184665 Glutathione S-transferase
CC1G_04060 SCHCODRAFT_13677 LACBIDRAFT_180892 Hydrophobin-251
CC1G_10471 SCHCODRAFT_232646 LACBIDRAFT_295571 Aromatic peroxygenase precursor
CC1G_.12330 SCHCODRAFT_16019 LACBIDRAFT_256021 S-layer domain-containing protein
2 (PC: 0.99) CC1G_00069 SCHCODRAFT_48115 LACBIDRAFT_312065 C factor cell-cell signaling protein
CC1G_00217 SCHCODRAFT_46102 LACBIDRAFT_323571 Non-Catalytic module family EXPN protein
CC1G_03515 SCHCODRAFT_82058 LACBIDRAFT_328112 Hydrophobin-like protein
CC1G_04659 SCHCODRAFT_110821 LACBIDRAFT_298314 Hypothetical protein
CC1G_05652 SCHCODRAFT_232455 LACBIDRAFT_309898 TKL/TKL-ccin protein kinase
CC1G_09209 SCHCODRAFT_110821 LACBIDRAFT_298284 BTB/POZ domain containing protein
CC1G_10966 SCHCODRAFT_258323 LACBIDRAFT_236299 rCop c3
3 (PC: 0.99) CC1G_02571 SCHCODRAFT_76530 LACBIDRAFT_293318 Chitin deacetylase
CC1G_03037 SCHCODRAFT_53388 LACBIDRAFT_239714 Monocarboxylate transporter
CC1G_03320 SCHCODRAFT_39718 LACBIDRAFT_145110 Spo11
CC1G_09616 SCHCODRAFT_235946 LACBIDRAFT_310809 Prenyl cysteine carboxyl methyltransferase
CC1G_06563 SCHCODRAFT_46720 LACBIDRAFT_243581 Exo-beta-1,3-glucanase
CC1G_12688 SCHCODRAFT_55636 LACBIDRAFT_296585 Aldo/keto reductase
4 (PC: 0.99) CC1G_03949 SCHCODRAFT_258034 LACBIDRAFT_298461 Salicylate hydroxylase
CC1G_05817 SCHCODRAFT_258034 LACBIDRAFT_298461 Salicylate 1-monooxygenase
5 (PC: 0.99) CC1G_06868 SCHCODRAFT_53362 LACBIDRAFT_182606 Endo-1,3(4)-beta-glucanase
CC1G_07550 SCHCODRAFT_56140 LACBIDRAFT_291657 Lipase
CC1G_05781 SCHCODRAFT_72461 LACBIDRAFT_291413 OrdA protein
CC1G_08860 SCHCODRAFT_80181 LACBIDRAFT_172283 Cation/H + exchanger
CC1G_09431 SCHCODRAFT_49922 LACBIDRAFT_190903 O-methylsterigmatocystin oxidoreductase
CC1G_11000 SCHCODRAFT_107054 LACBIDRAFT_310382 Hypothetical protein
6 (PC: 0.94) CC1G_02440 SCHCODRAFT_103563 LACBIDRAFT_308947 ras GEF
CC1G_07544 SCHCODRAFT_80832 LACBIDRAFT_243185 DUF89-containing protein
CC1G_05410 SCHCODRAFT_104205 LACBIDRAFT_301153 Hypothetical protein
CC1G_02628 SCHCODRAFT_82883 LACBIDRAFT_327335 C2h2 conidiation transcription factor FlbC
CC1G_11894 SCHCODRAFT_68168 LACBIDRAFT_296675 bas1, putative
CC1G_05329 SCHCODRAFT_85265 LACBIDRAFT_300118 Hypothetical protein
CC1G_09061 SCHCODRAFT_27314 LACBIDRAFT_308057 MNNG and nitrosoguanidine resistance protein
CC1G_02380 SCHCODRAFT_77933 LACBIDRAFT_314347 Clavaminate synthase-like protein
CC1G_05793 SCHCODRAFT_85265 LACBIDRAFT_300118 Hypothetical protein
CC1G_14014 SCHCODRAFT_49922 LACBIDRAFT_248655 O-methylsterigmatocystin oxidoreductase
CC1G_11136 SCHCODRAFT_232299 LACBIDRAFT_294457 Hypothetical protein
CC1G_00780 SCHCODRAFT_106836 LACBIDRAFT_305061 BGP, partial
CC1G_03120 SCHCODRAFT_83385 LACBIDRAFT_307143 Endoglucanase II
CC1G_02257 SCHCODRAFT_46132 LACBIDRAFT_295167 Metalloprotease
CC1G_04116 SCHCODRAFT_75425 LACBIDRAFT_179508 Glutathione S-transferase Gst3
CC1G_11081 SCHCODRAFT_75425 LACBIDRAFT_179508 Glutathione S-transferase
CC1G_12752 SCHCODRAFT_50449 LACBIDRAFT_253329 Cytochrome P450
CC1G_12253 SCHCODRAFT_269973 LACBIDRAFT_296037 Nrg1-like Zn-finger transcription factor
CC1G_11786 SCHCODRAFT_58473 LACBIDRAFT_315853 Hypothetical protein
CC1G_09938 SCHCODRAFT_80558 LACBIDRAFT_330070 Ferritin/ribonucleotide reductase-like-protein
CC1G_02724 SCHCODRAFT_255861 LACBIDRAFT_295183 Hypothetical protein
CC1G_05802 SCHCODRAFT_65657 LACBIDRAFT_256254 Indole-3-acetaldehyde dehydrogenase
CC1G_15739 SCHCODRAFT_76887 LACBIDRAFT_146952 Ricin B fold protein
  1. *Functional annotation as determined by PSI-BLAST.
  2. †Pearson correlation coefficient.