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Figure 7 | BMC Genomics

Figure 7

From: Characterizing a collective and dynamic component of chromatin immunoprecipitation enrichment profiles in yeast

Figure 7

Correlation of TF co-enrichment with gene expression and nucleosome occupancy. (L) Scatter plot of TF co-enrichment vs. gene expression in YPD from Huebert and Gasch [31]. Each point is the expression level for a gene and the co-enrichment (MLFE) of neighboring regions; expression values are log2 of quantile normalized intensity values. Plotted as a black line is a fit of all the data to a linear model (r = 0.17). (R) Scatter plot of TF co-enrichment vs. nucleosome occupancy by nucleosome ChIP from Bernstein et al. [32]. Each point is a probed region assayed both by Harbison et al. and Bernstein et al. Plotted as a line is a fit of all the data to a linear model (r = −0.31).

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