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Table 3 Candidates for hypersensitivity initiation from apoplast proteomics data

From: Quantitative proteomics and transcriptomics of potato in response to Phytophthora infestans in compatible and incompatible interactions

Secreted proteins Increased in incompatible clones
Protein ID Name 6 h 24 h 72 h
PGSC0003DMP400015021 Cellulase containing protein *   
PGSC0003DMP400051976 Glucan endo-1,3-beta-D-glucosidase *   
PGSC0003DMP400012140 Polyamine oxidase *   
PGSC0003DMP400056168 Mitogen-activated protein kinase kinase kinase *   
Q9LTJ3 Putative uncharacterized protein At5g59350 *   
Q9SWI1 Protein PHYTOCHROME KINASE SUBSTRATE 1 *   
DES_g15011_t1 Uncharacterized protein   *  
PGSC0003DMP400011041 Leucine-rich repeat family protein   *  
PGSC0003DMP400015631 Aldo-keto reductase family 4 member C10   *  
PGSC0003DMP400027722 Bacterial-induced peroxidase   *  
PGSC0003DMP400028029 Alpha-glucosidase   *  
PGSC0003DMP400030201 Strictosidine synthase   *  
PGSC0003DMP400046981 Kunitz trypsin inhibitor   *  
PGSC0003DMP400049292 Pattern formation protein   *  
PGSC0003DMP400051822 Actin-101   *  
PGSC0003DMP400001286 † Conserved gene of unknown function †   *  
PGSC0003DMP400002450 Conserved gene of unknown function   *  
PGSC0003DMP400003176 Zinc finger family protein   *  
PGSC0003DMP400008097 Rho guanine dissociation inhibitor   *  
PGSC0003DMP400009086 † PR1 protein †   *  
PGSC0003DMP400035459 Triacylglycerol lipase   *  
PGSC0003DMP400040683 ATP binding protein   *  
PGSC0003DMP400045856 Pentatricopeptide repeat-containing protein   *  
PGSC0003DMP400057833 Polyprotein protein   *  
Q9FJT0 Putative uncharacterized protein   *  
Q9LDP1 F28H19.2 protein (F2J6.15 protein)   *  
Q9LVB8 Probable carboxylesterase 120 (AtCXE20) (EC 3.1.1.1)   *  
Q9SCZ5 Putative uncharacterized protein F26O13.180   *  
PGSC0003DMP400005465 Osmotin * *  
PGSC0003DMP400018074 Phytophthora-inhibited protease 1 * *  
PGSC0003DMP400021164 Non-specific lipid-transfer protein * *  
DES_g20722_t1 Uncharacterized protein * *  
O22214 Putative uncharacterized protein At2g41520 * *  
O64572 Expressed protein (Uncharacterized protein) * *  
PGSC0003DMP400006538 Aspartic proteinase nepenthesin-1 * *  
PGSC0003DMP400012829 Leucine-rich repeat receptor kinase * *  
PGSC0003DMP400026222 Cytochrome P450 * *  
PGSC0003DMP400038388 Rhicadhesin receptor * *  
PGSC0003DMP400059150 Gene of unknown function * *  
PGSC0003DMP400067598 O-methyltransferase * *  
PGSC0003DMP400013560 Gene of unknown function   * *
PGSC0003DMP400053911 Beta-galactosidase   * *
PGSC0003DMP400012597 Epidermis-specific secreted glycoprotein EP1   * *
PGSC0003DMP400016025 Pentatricopeptide repeat-containing protein   * *
PGSC0003DMP400006168 Glycosyl hydrolase family * * *
PGSC0003DMP400017287 † Cytochrome P450 hydroxylase † * * *
PGSC0003DMP400035498 † Peroxidase † * * *
PGSC0003DMP400064458 Gag-pol protein * * *
Q9FKV2 Berberine bridge enzyme (FAD-binding and BBE domain-containing protein) * * *
  1. Proteins with increased abundance in the secretome for the two incompatible clones Sarpo Mira and SW93-1015, but not for compatible Desirée. Proteins with a minimum 4-fold increase in both Sarpo Mira and SW93-1015 at 6 or 24 hpi and stable or decreased abundance in Desirée at 6 and 24 hpi were selected. Up-regulation is indicated with an asterisk. The symbol † indicates proteins that were not identified using at least one peptide specific for the listed gene. Symbol (*) indicates the time point in which the change was observed.