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Table 4 Putative effector targets

From: Quantitative proteomics and transcriptomics of potato in response to Phytophthora infestans in compatible and incompatible interactions

Protein ID Name Desiree 6 h Desiree 24 h
PGSC0003DMP400017664 Transcription factor *  
Q9SZ87 Reverse transcriptase (RNA-dependent DNA polymerase) *  
Q9SPM5 GDA1/CD39 (nucleoside phosphatase) family *  
Q8LBK6 Glutaredoxin *  
Q9SSD1 Leucine rich repeat *  
PGSC0003DMP400018076 Cysteine protease *  
PGSC0003DMP400045977 Cystatin *  
PGSC0003DMP400024264 Conserved gene of unknown function *  
PGSC0003DMP400020961 5′-nucleotidase sure *  
O81459 ATPase family associated with various cellular activities (AAA) * *
PGSC0003DMP400049952 Pectinesterase-2 * *
F4J1D9 MutS domain II * *
PGSC0003DMP400008301 Pto-interacting protein 1 * *
Q8VZM7 Protein of unknown function (DUF1012) * *
Q9FJV2 FBD, Leucine Rich Repeat * *
PGSC0003DMP400006604 Beta-galactosidase † * *
PGSC0003DMP400021388 HSP transcription factor † * *
PGSC0003DMP400001052 Peptidyl-prolyl cis-trans isomerase * *
PGSC0003DMP400054971 Phospholipase A1 † * *
PGSC0003DMP400065569 Gene of unknown function * *
DES.g31837.t1   * *
PGSC0003DMP400056405 Histidine kinase 3B * *
PGSC0003DMP400016823 Kunitz-type proteinase inhibitor * *
PGSC0003DMP400044843 Serine-threonine protein kinase, plant-type * *
PGSC0003DMP400004370 Glutamate decarboxylase 4a * *
Q9FGS4 Fe-S metabolism associated domain, Quinolinate synthetase A protein * *
A0ME24 Putative uncharacterized protein * *
O81861 Glycosyl hydrolases family 18 * *
PGSC0003DMP400008705 Subtilase family protein * *
PGSC0003DMP400068385 Conserved gene of unknown function * *
PGSC0003DMP400004622 Beta-galactosidase * *
PGSC0003DMP400055439 Protein kinase atmrk1 * *
PGSC0003DMP400017510 Cysteine protease 14 * *
PGSC0003DMP400017719 Multicopper oxidase   *
Q8VZG2 Domain associated at C-terminal with AAA, ATPase family associated with various cellular activities (AAA)   *
PGSC0003DMP400048051 Glutathione S-transferase T5   *
Q4FE22 Potato inhibitor I family   *
PGSC0003DMP400049086 Thioredoxin peroxidase   *
Q9FMR7 Mitochondrial fission ELM1   *
PGSC0003DMP400025698 High mobility group protein   *
  1. Proteins with decreased abundance in the secretome for the compatible clone Desiree, but not for the two incompatible clones Sarpo Mira and SW93-1015. Proteins with a minimum 8-fold down-regulation in Desiree and stable in both Sarpo Mira and SW93-1015 at 6 or 24 hpi were selected. 8-fold down-regulation is indicated with an asterisk. The symbol † indicates proteins that were not identified using at least one peptide specific for the listed gene. Symbol (*) indicates the time point in which the change was observed.