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Table 4 Putative effector targets

From: Quantitative proteomics and transcriptomics of potato in response to Phytophthora infestans in compatible and incompatible interactions

Protein ID

Name

Desiree 6 h

Desiree 24 h

PGSC0003DMP400017664

Transcription factor

*

 

Q9SZ87

Reverse transcriptase (RNA-dependent DNA polymerase)

*

 

Q9SPM5

GDA1/CD39 (nucleoside phosphatase) family

*

 

Q8LBK6

Glutaredoxin

*

 

Q9SSD1

Leucine rich repeat

*

 

PGSC0003DMP400018076

Cysteine protease

*

 

PGSC0003DMP400045977

Cystatin

*

 

PGSC0003DMP400024264

Conserved gene of unknown function

*

 

PGSC0003DMP400020961

5′-nucleotidase sure

*

 

O81459

ATPase family associated with various cellular activities (AAA)

*

*

PGSC0003DMP400049952

Pectinesterase-2

*

*

F4J1D9

MutS domain II

*

*

PGSC0003DMP400008301

Pto-interacting protein 1

*

*

Q8VZM7

Protein of unknown function (DUF1012)

*

*

Q9FJV2

FBD, Leucine Rich Repeat

*

*

PGSC0003DMP400006604

Beta-galactosidase †

*

*

PGSC0003DMP400021388

HSP transcription factor †

*

*

PGSC0003DMP400001052

Peptidyl-prolyl cis-trans isomerase

*

*

PGSC0003DMP400054971

Phospholipase A1 †

*

*

PGSC0003DMP400065569

Gene of unknown function

*

*

DES.g31837.t1

 

*

*

PGSC0003DMP400056405

Histidine kinase 3B

*

*

PGSC0003DMP400016823

Kunitz-type proteinase inhibitor

*

*

PGSC0003DMP400044843

Serine-threonine protein kinase, plant-type

*

*

PGSC0003DMP400004370

Glutamate decarboxylase 4a

*

*

Q9FGS4

Fe-S metabolism associated domain, Quinolinate synthetase A protein

*

*

A0ME24

Putative uncharacterized protein

*

*

O81861

Glycosyl hydrolases family 18

*

*

PGSC0003DMP400008705

Subtilase family protein

*

*

PGSC0003DMP400068385

Conserved gene of unknown function

*

*

PGSC0003DMP400004622

Beta-galactosidase

*

*

PGSC0003DMP400055439

Protein kinase atmrk1

*

*

PGSC0003DMP400017510

Cysteine protease 14

*

*

PGSC0003DMP400017719

Multicopper oxidase

 

*

Q8VZG2

Domain associated at C-terminal with AAA, ATPase family associated with various cellular activities (AAA)

 

*

PGSC0003DMP400048051

Glutathione S-transferase T5

 

*

Q4FE22

Potato inhibitor I family

 

*

PGSC0003DMP400049086

Thioredoxin peroxidase

 

*

Q9FMR7

Mitochondrial fission ELM1

 

*

PGSC0003DMP400025698

High mobility group protein

 

*

  1. Proteins with decreased abundance in the secretome for the compatible clone Desiree, but not for the two incompatible clones Sarpo Mira and SW93-1015. Proteins with a minimum 8-fold down-regulation in Desiree and stable in both Sarpo Mira and SW93-1015 at 6 or 24 hpi were selected. 8-fold down-regulation is indicated with an asterisk. The symbol † indicates proteins that were not identified using at least one peptide specific for the listed gene. Symbol (*) indicates the time point in which the change was observed.