Table 1 The number of molecular sequence records in ShrimpGPAT
From: ShrimpGPAT: a gene and protein annotation tool for knowledge sharing and gene discovery in shrimp
Species | # of records | ||||
|---|---|---|---|---|---|
Scientific name | Common name | EST | Transcript contigsa | cDNA | Protein |
Penaeus (Penaeus) monodon | Black tiger shrimp | 86,327 | 18,410 | 1,976 | 602 |
Penaeus (Litopenaeus) vannamei | Pacific whiteleg shrimp | 176,592 | 47,058 | 74,828 | 574 |
Penaeus (Litopenaeus) setiferus | White shrimp | 1,042 | 126 | 135 | 27 |
Penaeus (Fenneropenaeus) chinensis | Fleshy prawn | 10,446 | 2,714 | 478 | 257 |
Penaeus (Fenneropenaeus) indicus | Indian prawn | 714 | 155 | 348 | 127 |
Penaeus (Marsupenaeus) japonicus | Kuruma prawn | 3,156 | 662 | 989 | 743 |
Macrobrachium rosenbergii | Giant freshwater prawn | 4,427 | 8,550b | 635 | 389 |
Cherax quadricarinatus | Cray fish | 120 | 90 | 239 | 226 |
Pacifastacus leniusculus | Signal crayfish | 802 | 199 | 914 | 88 |
Homarus americanus | American lobster | 29,957 | 12,709 | 186 | 227 |
Scylla olivacea | Orange mud crab | 203 | 80 | 121 | 0 |
Scylla paramamosain | Green mud crab | 3,972 | 56 | 720 | 698 |
Callinectes sapidus | Blue crab | 10,563 | 2,104 | 173 | 161 |
Carcinus maenas | Green crab | 15,559 | 7,672 | 273 | 275 |