Figure 10

cDNA read profiles (bottom) and Northern blots (top) of selected ncRNAs. Read profiles left: tmRNA (350 counts); right: tRNA 44 (1000 counts); The upper half of each read profile represents the plus strand and the lower one the minus strand. Annotation by RNAz (blue), RNALfold (rose) and NCBI/BacProt (green), cDNA reads of the (+)-library (orange) and of the (-)-library (red) and ncRNA annotation by GORAP (pink); colors of genomic sequences represent nucleotides A (green), C (red), G (orange) and T (blue); counts - scale of read display adapted to the maximal number of detected reads (see Table 3). For Northern blots, see Methods; -p – with 5’-OH ; + p – with 5’ monophosphate.