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Table 2 Predicted targets of five differentially expressed miRNAs during early development of Senegalese sole

From: Thermal plasticity of the miRNA transcriptome during Senegalese sole development

miRNA

Ensembl Gene ID

Gene name

miRanda

RNAhybrid

Score

Energy (kcal/mol)

Energy (kcal/mol)

miR-130c

ENSGACG00000005536

EIF4E

156

-25.65

-28.7

miR-130c

ENSGACG00000018076

MAPK9

142

-21.42

-24.4

miR-17a-5p

ENSGACG00000017027

Sestrin3

143

-24.03

-26.8

miR-17a-5p

ENSGACG00000013102

MAPK3

154

-21.58

-26.2

miR-17a-5p

ENSGACG00000004911

MAPK13

140

-22.15

-24.1

miR-181a-5p

ENSGACG00000019700

DDIT4

146

-20.26

-22.5

miR-181a-5p

ENSGACG00000013102

MAPK3

161

-20.51

-26

miR-181a-3p

ENSGACG00000018991

Calpain 1

156

-20.35

-31

miR-206-3p

ENSGACG00000008895

Sestrin1

144

-20.56

-22.7

  1. Targets were predicted using miRanda and RNAhybrid. MiRanda score and minimum free energy (ΔG kcal · mol-1) calculated using miRanda and RNAhybrid are marked for each miRNA-3’-UTR target prediction.