Repeat | Class | Order | Superfamily | Number of complete TEs | Number of remaining degenerate copies | Percentage in the genome |
---|---|---|---|---|---|---|
Retrotransposon | Class I | - | - | 198 | 311 | 5.6 |
Non-LTR retrotransposon | Class I | LINE | - | 107 | 80 | 2.4 |
Non-LTR retrotransposon | Class I | LINE | I | 101 | 80 | 2.4 |
Non-LTR retrotransposon | Class I | LINE | R2 | 6 | - | <0.00 |
LTR-retrotransposon | Class I | LTR | - | 91 | 231 | 3.2 |
LTR-retrotransposon | Class I | LTR | Copia | 10 | 13 | 0.2 |
LTR-retrotransposon | Class I | LTR | Gypsy | 81 | 143 | 2.9 |
TRIM | Class I | LTR | Copia | - | 7 | <0.00 |
TRIM | Class I | LTR | Gypsy | - | 2 | <0.00 |
Solo-LTR | Class I | LTR | Copia | - | 3 | <0.00 |
Solo-LTR | Class I | LTR | Gypsy | - | 63 | <0.00 |
DNA transposon | Class II | Â | Â | 29 | 83 | 0.3 |
DNA transposon | Class II | TIR | Tc1-Mariner | 29 | 76 | 0.3 |
MITE | Class II | TIR | Tc1-Mariner | - | 7 | <0.00 |
Total Elements | Â | Â | Â | 227 | 397 | 5.9 |