Table 2 TE families belonging to the Gypsy superfamily
Family | Number of complete TEs | Number of potentially active TEs | Length of TE (Kb) | Length of LTR (bp) | Length gag (aa) | Length pol(aa) |
|---|---|---|---|---|---|---|
Gypsy-1_CH | 10 | 10 | 6.7 | 451 | 645 | 1,219 |
Gypsy-2_CH | 33 | 24 | 7.4-7.5 | 487-516 | 673-730 | 1,248-1,471 |
Gypsy-3_CH | 11 | 5 | 7.5 | 502-503 | 717-730 | 1,379-1,418 |
Gypsy-4_CH | 14 | 11 | 7.5-8.4 | 497-518 | 717-730 | 1,358-1,420 |
Gypsy-5_CH | 5 | 4 | 7.4-7.5 | 485-494 | 710-730 | 1,383-1,384 |
Gypsy-6_CH | 5 | 3 | 7.4 | 494 | 717 | 1,384 |
Gypsy-7_CH | 2 | 0 | 6.2-7.1 | 442 | - | - |
Gypsy-8_CH | 1 | 0 | 6.8 | 372 | - | - |