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Table 4 TpA/ApT* ratio for transposons in the genome of C. heterostrophus

From: Characterization and potential evolutionary impact of transposable elements in the genome of Cochliobolus heterostrophus

Superfamily

Family

Number of TEs

Number of TEs near genes

TpA/ApT

Tc1 - Mariner

-

7

4

1.08

Tc1 - Mariner

-

4

1

1.04

Copia

Copia-1_CH

9

0

0.80

I

I-2_CH

23

4

1.60

Gypsy

Gypsy-1_CH

10

0

0.85

Gypsy

Gypsy-5_CH

5

0

0.83

  1. *Standard reference value of the RIP indice is TpA/ApT > 0.89 [60].