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Table 1 Summary of duplications identified by MCScanX ( Arabidopsis thaliana against itself)

From: The Arabidopsis Kinome: phylogeny and evolutionary insights into functional diversification

Duplication mechanism

All genes (%)

Kinase-specific (%)

WGD/segmental

7496 (26.1)

335 (35.7)

Dispersed/transposed

11779 (41.0)

444 (47.4)

Proximal

1323 (4.6)

67 (7.2)

Tandem

2875 (10.0)

89 (9.5)

Singleton

5233 (18.2)

2 (0.2)

  1. For each duplication mechanism and singleton genes the number and percentage of occurrences is listed in the set of all genes and kinase encoding genes.