Figure 2
From: Design and development of exome capture sequencing for the domestic pig (Sus scrofa)
Additional gene: putative SMG1 phosphatidylinositol 3-kinase. Genomic region displayed in Ensembl with good alignment to a UniGene mRNA sequence representing an 11 kb putative SMG1 phosphatidylinositol 3-kinase-related sequence which is homologous to the human SMG1 gene. Alignments to several cDNA and EST sequences are annotated in Ensembl in this region (22,400-100,300 bp) on unplaced scaffold GL894597.1 but no Ensembl gene model has been built or core gene defined. The red regions show the pig exome capture regions described in this paper, derived from alignments of UniGene sequences against the genome (see “Methods”). NCBI annotation of the pig genome includes a gene model for SMG1 at this location.