Table 2 Gene model alterations and novel mappings
From: Proteogenomic mapping of Mycoplasma hyopneumoniae virulent strain 232
5' extensions | ||||||
|---|---|---|---|---|---|---|
Locus | Old Start | New Start | Stop | Direction | Peptides | Notes |
mhp063 | 74727 | 74166 | 76196 | + | 4 | Extension present in strains 7448, 7422, 168 and J |
mhp073 | 91551 | 91023 | 92147 | + | 4 | Extension present in strains 7448 and J |
mhp451 | 555365 | 555692 | 554796 | - | 3 | Extension present in strains 7448, 7422 and J |
Intergenic mappings | ||||||
Start | Stop | Direction | Peptides | Notes | ||
34617 | 34910 | + | 4 | Unannotated gene; overlaps mhp029; Blast indicates gene is gatC in other strains | ||
120237 | 120040 | - | 3 | Unannotated gene; Blast indicates gene is rpmF in strain J | ||