Table 3 Repeated sequences annotation of transposable elements via TIGR database
From: Identification of cucurbitacins and assembly of a draft genome for Aquilaria agallocha
Class | No. | Size (bp) |
|---|---|---|
Retrotransposon | 747 | 142,807 |
Transposon | 109 | 15,237 |
Miniature Inverted-repeat Transposable Elements (MITE) | 1 | 62 |
Centromere-specific retrotransposon | 1 | 57 |
Centromere satellite | 10 | 778 |
Unclassified centromere sequence | 8 | 1,770 |
Telomere sequence | 11 | 2,215 |
Telomere associated | 18 | 3,457 |
rDNA 45S | 48 | 11,686 |
rDNA 5S | 77 | 9,655 |
Unclassified (total) | 361 | 38,797 |