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Table 2 Genomic features of sequenced chlorophyte green algae

From: Oil accumulation mechanisms of the oleaginous microalga Chlorella protothecoides revealed through its genome, transcriptomes, and proteomes

 

CPRO

CVAR

CSUB

CREI

VCAR

MPUS

OTAR

Taxonomic class

T

T

T

C

C

M

M

Assembly length (Mb)

22.9

46.2

48.8

121

138

21.9

12.6

GC content (%)

63

67

53

64

56

65

58

Repeat sequences (%)

6.1

8.9

7.2

16.7

23.8

8.8

5.1

Number of gene

7,039

9,791

9,851

15,143

14,520

10,575

8,166

Average gene length (bp)

2,863

2,928

3,503

4,312

5,269

1,557

nd

Average number of exons per gene

5.72

7.3

8.2

8.33

7.78

1.9

1.57

Average exon length (bp)

207

170

182

190

194

731

750

Mean length of introns (bp)

246

209

240

373

491

187

103

Coding sequence ratio (%)

3.2

4.7

5.0

8.0

9.5

2.1

1.6

  1. CPRO: Chlorella protothecoides sp.0710; CVAR: Chlorella variabilis NC64A; CSUB: Coccomyxa subellipsoidea C-169; CREI: Chlamydomonas reinhardtii; VCAR: Volvox carteri; MPUS: Micromonas pusilla CCMP1545; OTAR: Ostreococcus tauri.
  2. T: Trebouxiophyceae; C: Chlorophyceae; M: Mamiellophyceae.