Skip to main content

Table 1 Classification of three chronological genomes by sequence divergence of the collinear gene pairs *

From: Functional innovations of three chronological mesohexaploid Brassica rapa genomes

 

Recent

Young

Old

Avg.K s

0.53

1.17

2.19

Syntenic segment information

No. of syntenic segments

302

366

15

No. of collinear protein pairs

29,239

7,335

109

Information of B. rapa genome segment

Size of genome segment

250,327,645

203,058,429

5,49,677

(%)

(97.69)

(79.24)

(2.14)

No. of integrated GBs

172

223

14

Average collinear gene pairs

1,217

318

5

No. of distinct A. thaliana genes

18,701

5,209

109

in synteny

(53.48%)

(14.90%)

(0.31%)

Collinear-pairs/Mb

107

37

10

  1. *Detailed information about this table is represented in Additional file 2.