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Table 3 Classification of divergence time of B. rapa gene based on A. thaliana collinear pairs

From: Functional innovations of three chronological mesohexaploid Brassica rapa genomes

Index

Retention patternsa

Standard deviation of K s values

No. of B. rapaproteins (%)

 

Recent

Young

Old

Recent

Young

Old

 

1

O

X

X

0.31

-

-

22,371 (54.54)

2

O

O

X

0.98

1.31

-

6,740 (16.43)

3

O

X

O

0.29

-

0.86

84 (0.20)

4

O

O

O

0.28

0.81

0.83

17 (0.04)

5

X

X

X

-

-

-

11,235 (27.39)

6

X

O

X

-

0.62

-

564 (1.37)

7

X

X

O

-

-

0.85

4 (0.01)

8

X

O

O

-

0.78

0.30

4 (0.01)

  1. aPresence (O) and/or absence (X) of collinear gene pairs in recent, young and old genomic segments. ‘-‘ denotes absence of collinear gene pairs.