Skip to main content

Table 1 Properties of the methylC-seq data sets used in this study

From: Bis-class: a new classification tool of methylation status using bayes classifier and local methylation information

Species

Subtype

Sample ID

Coverage

Variance

Variance/Coverage

Proportion of under 3 reads (% of 1 read)

Honey Bee

Worker

SRR039814

5.86

22.96

3.918

0.4255 (0.1547)

Queen

SRR039815

7.24

27.521

3.801

0.3728 (0.1118)

Forager

SRR445767

3.86

10.28

2.663

0.5608 (0.1892)

 

SRR445768

4.17

13.27

3.182

0.5345 (0.1825)

 

SRR445769

3.86

9.951

2.578

0.5620 (0.1944)

 

SRR445770

4.04

12.838

3.177

0.5521 (0.1907)

 

SRR445771

4.51

14.510

3.217

0.4823 (0.1522)

 

SRR445773

5.86

18.275

3.119

0.3111 (0.0798)

Nurse

SRR445774

3.13

6.081

1.943

0.6709 (0.2512)

 

SRR445775

4.49

14.812

3.299

0.4868 (0.1552)

 

SRR445776

3.84

12.203

3.178

0.5802 (0.2032)

 

SRR445777

4.51

14.978

3.321

0.4856 (0.1553)

 

SRR445778

2.65

6.846

2.583

0.7801 (0.359)

 

SRR445799

4.05

12.014

2.966

0.5434 (0.1875)

Human (Brain)

 

HS1570_0731

8.59

37.157

4.32

0.2874 (0.0945)