Skip to main content

Table 1 Summary of alignment statistics of RNA-Seq in H3 and S1

From: Anatomy and transcript profiling of gynoecium development in female sterile Brassica napus mediated by one alien chromosome from Orychophragmus violaceus

 

H3

 

S1

 

Total reads

6990973

 

7502922

 

Total mapped reads

4396449

62.89%

4652862

62.01%

Perfect match

2440840

34.91%

2564012

34.17%

< = 2 bp mismatch

1955609

27.97%

2088850

27.84%

unique match

3922411

56.11%

4106692

54.73%

Mapped genes

27653

 

28065

Â