Table 2 Pathway enrichment analysis of DEGs
KEGGapathway | DEGs with pathway annotation (2333) | All genes with pathway annotation (30493) | Qvalueb |
|---|---|---|---|
Linoleic acid metabolism | 17 (0.73%) | 46 (0.15%) | 2.396666e-06 |
Biosynthesis of secondary metabolites | 389 (16.67%) | 3987 (13.08%) | 6.888993e-06 |
Metabolic pathways | 681 (29.19%) | 7643 (25.06%) | 4.918936e-05 |
Glycolysis/Gluconeogenesis | 63 (2.7%) | 446 (1.46%) | 4.918936e-05 |
Flavonoid biosynthesis | 52 (2.23%) | 345 (1.13%) | 4.918936e-05 |
alpha-Linolenic acid metabolism | 38 (1.63%) | 227 (0.74%) | 7.964526e-05 |
Circadian rhythm - plant | 48 (2.06%) | 351 (1.15%) | 1.109326e-03 |
Glucosinolate biosynthesis | 22 (0.94%) | 127 (0.42%) | 3.626965e-03 |
Carbon fixation in photosynthetic organisms | 45 (1.93%) | 346 (1.13%) | 4.489689e-03 |
Valine, leucine and isoleucine degradation | 29 (1.24%) | 194 (0.64%) | 4.707493e-03 |
Ribosome biogenesis in eukaryotes | 68 (2.91%) | 590 (1.93%) | 5.175354e-03 |
Arginine and proline metabolism | 37 (1.59%) | 295 (0.97%) | 2.056500e-02 |
Protein processing in endoplasmic reticulum | 91 (3.9%) | 887 (2.91%) | 2.378769e-02 |
Glutathione metabolism | 37 (1.59%) | 301 (0.99%) | 2.491330e-02 |
Glycine, serine and threonine metabolism | 28 (1.2%) | 213 (0.7%) | 2.784337e-02 |
Starch and sucrose metabolism | 101 (4.33%) | 1025 (3.36%) | 3.905783e-02 |
Galactose metabolism | 28 (1.2%) | 224 (0.73%) | 4.579364e-02 |
Zeatin biosynthesis | 27 (1.16%) | 214 (0.7%) | 4.579364e-02 |
Propanoate metabolism | 22 (0.94%) | 165 (0.54%) | 4.579364e-02 |
Tropane, piperidine and pyridine alkaloid biosynthesis | 17 (0.73%) | 117 (0.38%) | 4.579364e-02 |