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Table 4 Annotation of PmNV putative ORFs

From: The genome and occlusion bodies of marine Penaeus monodon nudivirus (PmNV, also known as MBV and PemoNPV) suggest that it should be assigned to a new nudivirus genus that is distinct from the terrestrial nudiviruses

ORF

Strand

Position

Length

Best BLAST match

Signature

Start

End

nt

aa

ORF, protein encoded, or mass

Species

aa identity (% match identity)

E value

1

+

1

1359

1356

452

polyhedrin

    

2

-

1525

1989

462

154

    

coiled-coil

3

-

2033

4861

2826

942

von Willebrand factor type A

Frankia sp. CN3

33

8 × 10-3

vWFA, ZF_RING_2

4

-

4954

5913

957

319

     

5

+

5998

9273

3273

1091

DNA polymerase

Helicoverpa zea nudivirus 2

26

2 × 10-102

POLBc

6

+

9354

10559

1203

401

methyltransferase

Ceratitis capitata

33

 

FtsJ

7

-

10563

10772

207

69

    

TM

8

-

10779

11455

684

228

Ac92-like (sulfhydryl oxidase)

Heliothis zea virus 1

42

1 × 10-17

Evr1_Alr, TM

9

-

11455

13482

2025

675

vp91 (capsid)

Oryctes rhinoceros virus

31

7 × 10-32

ChtBD2, TM

10

+

13622

14971

1347

449

Odv-e56/pif-5 (envelope)

Heliothis zea virus 1

27

2 × 10-30

TM

11

-

13780

14331

549

183

    

TM

12

+

15057

15536

477

159

     

13

-

15325

15549

222

74

    

TM

14

+

15548

16807

1257

419

p47

Heliothis zea virus 1

24

1 × 10-5

 

15

-

16816

18108

1290

430

per-os infectivity factor 2 (pif-2)

Macrobrachium nudivirus

66

2 × 10-75

Baculo_44, coiled-coil, TM

16

+

17191

17598

405

135

OHCU decarboxylase

Sarcophilus harrisii

27

3 × 10-3

TM

17

-

18139

18987

846

282

HZV_115-like

Oryctes rhinoceros virus

33

0.58

p-loop_NTPase, NK superfamily

18

-

19071

20372

1299

433

     

19

+

20465

20869

402

134

     

20

+

20812

22083

1269

423

flap endonuclease 1 (FEN-1)

Heliothis zea virus 1

29

3 × 10-14

 

21

+

22080

22556

474

158

     

22

-

22553

23485

930

310

31 K structural protein

Chelonus inanitus

24

1 × 10-9

 

23

+

23615

26713

3096

1032

RNA polymerase (lef-8)

Heliothis zea virus 1

28

8 × 10-53

RNA_pol_Rpb2_6

24

+

26864

28057

1191

397

p51 late protein

Heliothis zea virus 1

23

4 × 10-9

SBP_BACTERIAL_1

25

-

28160

31906

3744

1248

    

AF-4, ZnF_C2H2

26

+

31688

31912

222

74

    

TM

27

-

31969

32715

744

248

     

28

-

34005

34214

210

69

     

29

-

34463

42040

7572

2524

    

TM

30

-

42077

42649

570

190

     

31

+

43013

43204

189

63

     

32

-

43300

43512

210

70

     

33

+

43884

44783

897

299

tripartite motif-containing protein 10-like

Alligator mississippiensis

37

7 × 10-9

RING, coiled-coil

34

-

44939

46594

1653

551

odv-e66 (chondroitin lyase)

Oryctes rhinoceros virus

29

1 × 10-23

odv-e66

35

+

47292

48599

1305

435

     

36

-

48994

50901

1905

635

odv-e66 (chondroitin lyase)

Oryctes rhinoceros virus

26

5 × 10-22

odv-e66, TM

37

-

51077

51280

201

67

     

38

+

51353

52297

942

314

Guanosine monophosphate kinase

Heliothis zea virus 1

31

5 × 10-17

 

39

+

52359

53936

1575

525

per-os infectivity factor 1 (pif-1)

Heliothis zea virus 1

35

5 × 10-57

PIF, TM

40

-

53953

54573

618

206

     

41

+

54167

54595

426

142

    

TM

42

-

54573

56423

1848

616

orf21

Helicoverpa zea nudivirus 2

25

1 × 10-7

 

43

+

56796

57572

774

258

     

44

+

57636

58376

738

246

     

45

+

58384

59130

744

248

histidine decarboxylase (PmV-like)

Paramecium bursaria Chlorella virus NY-2B

27

0.15

 

46

+

59185

60201

1014

338

thymidylate kinase

Heliothis zea virus 1

27

2 × 10-14

p-loop_NTPase

47

+

60297

61211

912

304

     

48

+

61235

63007

1770

590

DNA ligase-like

Helicoverpa zea nudivirus 2

24

2 × 10-6

 

49

+

63022

63729

705

235

SJCHGC06586 protein

Schistosoma japonicum

38

1 × 10-7

RING, coiled-coil

50

-

63726

64037

309

103

     

51

+

64012

64221

207

69

    

TM

52

+

64249

64776

525

175

late expression factor 5 (lef-5)

Spodoptera frugiperda MNPV

31

0.028

Baculo_LEF-5_C

53

+

65083

65247

162

54

orf9

Helicoverpa zea nudivirus 2

37

0.003

TM

54

+

65268

65930

660

220

     

55

+

65979

66899

918

306

integrase

Helicoverpa zea nudivirus 2

33

1 × 10-32

INT_REC_C

56

+

66883

67752

867

289

very late expression factor 1

Heliothis zea virus 1

32

5 × 10-11

DNA_REC_C

57

-

67753

67959

204

68

    

coiled-coil

58

-

67965

69689

1722

574

lef-9

Heliothis zea virus1

32

3 × 10-63

 

59

+

69705

70553

846

282

38 K protein

Chelonus inanitus

37

2 × 10-17

 

60

-

70543

70824

279

93

     

61

+

70823

71515

690

230

orf49

Helicoverpa zea nudivirus 2

29

2.9

 

62

+

71512

71862

348

116

    

TM

63

-

71859

72215

354

118

     

64

-

72286

72633

345

115

    

TM

65

-

72717

74030

1311

437

orf51

Heliothis zea virus1

30

7 × 10-30

p-loop_NTPase

66

+

74079

75329

1248

416

orf84

Helicoverpa zea nudivirus 2

23

9 × 10-4

 

67

-

75597

76169

573

191

 

Crocosphaera watsonii

25

1 × 10-4

 

68

-

76400

76963

561

187

     

69

-

76980

77966

984

328

HzNVORF106-like protein

Cotesia congregata

24

1 × 10-6

 

70

-

77935

78555

618

206

     

71

-

78633

80174

1539

513

     

72

-

80247

82301

2052

684

p74 / pif-0 (envelope)

Heliothis zea virus 1

30

4 × 10-95

Baculo_74, TM

73

+

82393

83277

882

294

Zonadhesin

Sorex araneus

49

2 × 10-52

TM

74

-

82986

83258

237

90

    

TM

75

+

83362

83934

570

190

     

76

+

84006

85736

1728

576

helicase 2

Danaus plexippus

30

1 × 10-46

 

77

+

85788

86687

897

299

     

78

-

86652

87311

657

219

orf100

Heliothis zea virus 1

23

0.014

 

79

+

87109

89256

2145

715

helicase 2

Danaus plexippus

28

5 × 10-39

TM

80

+

89240

92104

2862

954

    

coiled-coil

81

-

90949

91242

291

97

     

82

+

92108

93043

933

311

     

83

+

93036

93647

609

203

     

84

-

93644

95206

1560

520

     

85

-

95208

95618

408

136

     

86

+

95617

96090

471

157

Ac81-like

Helicoverpa zea nudivirus 2

36

3 × 10-21

TM

87

+

96083

97993

1908

636

     

88

+

98006

98437

429

143

Ac68-like/pif-6

Helicoverpa zea nudivirus 2

29

8 × 10-11

TM

89

-

98438

99691

1251

417

     

90

+

99781

100530

720

240

VLF-1 protein

Helicoverpa zea nudivirus 2

28

5 × 10-5

 

91

-

100500

101912

1410

470

late expression factor 4

Helicoverpa zea nudivirus 2

26

4 × 10-18

 

92

-

101932

102255

321

107

     

93

-

102312

102890

576

192

per-os infectivity factor 3

Helicoverpa zea nudivirus 2

38

4 × 10-26

TM

94

-

102887

106702

3813

1271

helicase

Helicoverpa zea nudivirus 2

28

3 × 10-19

primase_Cte

95

+

106149

106370

219

73

     

96

+

106701

107399

696

232

19kda protein/Odv-e28/pif-4

Oryctes rhinoceros virus

38

5 × 10-21

Baculo_19, TM

97

-

107374

108123

747

249

     

98

+

108113

108946

831

277

Esterase/lipase

Helicoverpa zea nudivirus 2

27

3 × 10-4

AAA_17, TM

99

-

108943

110187

1242

414

GrBNV_gp67-like

Oryctes rhinoceros virus

29

9 × 10-8

EF_HAND_1, coiled-coil

100

-

110290

110595

303

101

11 K virion structural protein

Oryctes rhinoceros virus

32

4 × 10-6

TONB_DEPENDENT_REC_1, TM

101

-

110705

111106

399

133

     

102

+

111081

111881

798

266

     

103

-

111883

113868

1983

661

     

104

+

113631

113864

231

77

     

105

+

114593

114865

270

90

     

106

-

114757

115062

303

101

apoptosis inhibitor IAP-1

Buzura suppressaria NPV

43

2 × 10-13

BIR

107

-

115114

115821

705

235

HzNVORF9-like

Chelonus inanitus

25

4 × 10-10

 

108

+

115917

116648

729

243

orf101

Helicoverpa zea nudivirus 2

23

0.1

ribokinase_pfkB_like, TM

109

-

116750

116896

144

48

     

110

-

116971

117372

399

133

    

TM

111

+

117179

117469

288

96

     

112

+

117529

118617

1086

362

    

TM

113

+

118674

118928

252

84

sortilin-related receptor precursor

Acyrthosiphon pisum

42

9 × 10-9

LDLRA_2

114

+

118723

118911

186

62

    

TM

115

+

119035

119493

456

152

    

TM