Skip to main content

Table 2 Main characteristics of transcripts exhibiting an absolute value of log 2 fold change ≥ 3.0 between the two infection conditions

From: Differential gene expression and metabolomic analyses of Brachypodium distachyon infected by deoxynivalenol producing and non-producing strains of Fusarium graminearum

Functional category

Number

Percentage

Main tendancy*

Defense associated proteins

37

5.7

I (35/37)

Proteins involved in oxidative burst/redox status

17

2.6

I (14/17)

Cytochrome P450s

17

2.6

I (16/17)

UDP-glycosyltranferases

16

2.5

I (16/16)

Glutathion-S-tranferases

9

1.4

I (8/9)

Transport

24

3.7

I (22/24)

Amino acid metabolism

11

1.7

I (11/11)

Hormones synthesis and response

35

5.4

I (34/35)

Secondary metabolism

10

1.5

I (10/10)

Ubiquitination

12

1.8

I (12/12)

Signal transduction

96

14.8

I (95/96)

Regulatory proteins

77

11.8

I (72/77)

Photosynthesis

22

3.4

R (18/22)

Translation/Ribosomes

12

1.9

I (10/12)

Lipid metabolism

7

1.1

I (6/7)

General metabolism

7

1.1

R (5/7)

Miscellaneous

102

15.5

I (87/102)

Unknown proteins

139

21.5

I (128/139)

Total

650

100

 
  1. *Numbers in brackets represent the number of transcripts showing induction (I) or repression (R) among the total number of transcripts in each functional category.
Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us