A SNP in intron 8 of CD46 causes a novel transcript associated with mastitis in Holsteins

BMC Genomics

Table 2 Genetic effect of SNP (c. 1033 + 2184 C > T) on gEBV of STMA, CEL and MACL traits in Holsteins

Genotype	Sample number	Genotype frequencies	Allele frequencies	STMA gEBV	CEL gEBV	MACL gEBV
CC	68	0.69	0.8316(C)	0.1279^a	0.2580^a	−0.087^c
CT	27	0.28		−0.0037^b	0.1630^b	−0.2500^b
TT	3	0.03	0.1684 (T)	0.2330^a	0.2333^a	0.2^a

gEBV - Genomic estimated breeding value; STMA - Udder health synthesis; CEL - Milk somatic cell score; MACL - Occurrence of clinical mastitis;
Superscript different letters (a, b, c) in the same column denote difference p < 0.05.

ISSN: 1471-2164