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Table 1 Distribution of Anopheles gambiae midgut transcripts by Cufflinks class code

From: In depth annotation of the Anopheles gambiae mosquito midgut transcriptome

Transcript class codes

Number

Percentage

GENIC

5483

23.95

Complete match

5483

23.95

Novel isoform

4940

21.58

Within reference intron

2550

11.14

Read mapping errors

15

0.07

Overlap

517

2.26

Pre-mRNA

470

2.05

Exonic overlap to opposite strand

131

0.57

Subtotal

14106

61.62

INTERGENIC

  

Polymerase run-on

1821

7.96

Unknown Intergenic

5450

23.81

Repeat

707

3.09

Multiple classifications

805

3.52

Subtotal

8783

38.38

TOTAL

22889

100

  1. Number of Anopheles gambiae midgut transcripts for each Cufflinks class code and as a percentage of the total.