Table 1 Summary of genome and gene content for Metarhizium isolates, M. anisopliae Ma69, M. robertsii ARSEF23 and M. acridum CQMa102
Features | M. anisopliae Ma69 | M. robertsii ARSEF23 | M. acridum CQMa102 |
|---|---|---|---|
Genome assembly size (Mb) | 38.6 | 39.04 | 38.05 |
Genome assembly coverage | 380x | 100x | 107x |
Genome assembly N50 | 11 | 7 | 36 |
Genome assembly N50 length | 1,243,138 | 1,958,674 | 329,480 |
Total scaffolds in genome assembly | 577 | 176 | 241 |
G + C content (%) | 51.49 | 51.49 | 49.91 |
Protein-coding genes | 11415 | 10582 | 9849 |
Average protein length (aa) | 486 | 506 | 493 |
Gene density (genes per Mbp) | 295.7 | 271.1 | 258.8 |
Average exons per gene | 2.8 | 2.8 | 2.7 |
Predicted secreted proteins | 1413 | 1865 | 1490 |
tRNA genes | 132 | 141 | 122 |
Repetitive DNA (%) - de novo repeats | 2.4 | 2.12 | 4.42 |
Repetitive DNA (%) - RepBase (taxon: “fungi”) | 0.98 | 1.05 | 1.21 |
Overall RIP dominance (CpA ← → TpA) | 1.0 | 0.22 | 1.14 |
Overall TA/AT (repetitive DNA) | 1.02 | 1.02 | 1.31 |
Overall TA/AT (non-repetitive DNA) | 0.7 | 0.69 | 0.77 |