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Figure 3 | BMC Genomics

Figure 3

From: Motif depletion in bacteriophages infecting hosts with CRISPR systems

Figure 3

r PAM -values for type I-E for genus Vibrio . Each line shows one phage genome and is colored according to host species. Median of rPAM for CRISPR + (Vcho) is given as a red line and for CRISPR - (Vhar, Vpar and Vvul) as a blue line. Abbreviations: Vcho - Vibrio cholerae, Vhar - Vibrio harveyi, Vpar - Vibrio parahaemolyticus, Vvul - Vibrio vulnificus; strains within a host species are ordered arbitrarily as follows (bottom to top). Vibrio cholerae: CP-T1, vB_VchM-138, fs2, JA-1, VFJ, K139, VSK, fs1, VGJphi, VP2, VP5, KSF-1phi, kappa, VEJphi, ICP1, ICP2, ICP3, CTX, VCY-phi. Vibrio harveyi: VHML. Vibrio parahaemolyticus: pVp-1, VfO3K6, VPMS1, VfO4K68, VpV262, KVP40, Vf33, Vf12, VP882, VP93. Vibrio vulnificus: VvAW1.

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