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Table 5 Partial QTLs for individual and total isoflavone contents

From: Expression quantitative trait loci infer the regulation of isoflavone accumulation in soybean (Glycine max L. Merr.) seed

Traitsa

QTLb

Gm (LG)

Marker

Marker interval

Positionc

Environmentd

LOD score

R2(%)e

DZ

fqDZF_1

13(F)

Sat_103

Sat_103-Sat_262

188.34

E2

2.00

10.57

GC

qGCA2_1

08(A2)

Sat_040

Sat_040-Satt233

38.46

E3

2.65

6.01

 

fqGCD1b_1

02(Dlb)

Satt546

Satt546-Sat_459

215.67

E2

2.38

3.12

      

E5

2.21

4.17

GT

fqGTD2_1

17(D2)

Satt186

Satt186-Satt226

50.81

E1

2.00

3.41

      

E2

2.36

5.23

      

E3

5.76

10.98

      

E5

3.09

8.23

 

fqGTF_2

13(F)

Satt149

Satt149-Sat_234

41.23

E1

2.00

1.56

      

E3

2.49

4.17

      

E7

4.03

5.47

TI

fqTIF_1

13(F)

Satt423

Satt423-Satt569

6.01

E6

4.59

3.21

E7

2.15

4.2

  1. aDZ: Daidzein; GC:Glycitein; GT: Genistein; TI: Total isoflavone.
  2. bThe nomenclature of the QTL included four parts : QTL, trait, linkage group name and QTL order in the linkage group, respectively.
  3. cPosition from the left marker of the interval on each linkage group.
  4. dE1: at Harbin in 2005, E2: at Harbin in 2006, E3: at Hulan in 2006, E4:at Suihua in 2006, E5: at Harbin in 2007, E6: at Hulan in 2007, E7: at Suihua in 2007.
  5. eProportion of phenotypic variance (R2) explained by a QTL.
  6. fOverlapped loci of pQTL and eQTL.