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Table 2 Characteristics of the degradome sequences from orange leaf, flower and fruit

From: Genome-wide comparison of microRNAs and their targeted transcripts among leaf, flower and fruit of sweet orange

  

Total RNAs

Unique RNAs

Leaf

Raw reads

22826037

 
 

Clean readsa

20566571 (100%)

1448803 (100%)

 

Match mRNA reference dataset

17683257 (85.98%)

1055651 (72.86%)

Flower

Raw reads

19030542

 
 

Clean readsa

17629275 (100%)

1093131 (100%)

 

Match mRNA reference dataset

14577696 (82.69%)

733751 (67.12%)

Fruit

Raw reads

21213198

 
 

Clean readsa

18284467 (100%)

331940 (100%)

 

Match mRNA reference dataset

16047135 (87.76%)

187295 (56.42%)

  1. aLow quality sequences, sequences shorter than 18 nt, and adaptor contaminants were removed.