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Table 1 Results from creating SAP databases and using them for searching proteomic datasets

From: Using Galaxy-P to leverage RNA-Seq for the discovery of novel protein variations

Sample SAP database Proteomic identifications
SAPs SNP sites SAP Peptide IDs* SNPs ID’d
Jurkat human cells 9,168 6,924 522 491
B6 mouse islets 1 1 N/A N/A
CAST mouse islets 476 249 22 19
  1. *peptide passing a 1% FDR.